Preclinical imaging facility

The Barts Cancer Institute Microscopy Facility at Queen Mary University of London houses a wide range of imaging equipment, offering affordable and accessible in vivo imaging solutions.

Welcome to the Barts Cancer Institute Preclinical Imaging Facility at Queen Mary University of London. We house a wide range of imaging equipment, offering affordable and accessible in vivo imaging solutions.

Our facilities include a fully equipped radiochemistry laboratory where our expert staff can assist in developing custom-targeted imaging agents for PET and SPECT or molecular radiotherapy agents. We have a strong commitment to promoting the 3Rs’ advantages of imaging for reduction of animal numbers and refinement of procedures.

While we specialize in cancer research, our capabilities extend beyond oncology, and we can help design imaging studies for various disease models. We routinely handle applications such as tumour screening for early detection and size-matched inclusion in studies, assessment of therapy response, reporter gene imaging, receptor-targeted imaging, and imaging of hard-to-assess cancers, including orthotopic and spontaneous models (e.g., pancreatic, lung, brain, ovarian) and metastatic models. Additionally, we can assist with a broad range of other disease models, including those related to infection and inflammation, neurology, trauma and healing, bone and dental research, and cardiovascular applications.

Contact details

For general enquiries:

Managers:

Location

We are located on the lower-ground floor of John Vane Science Centre.

Address

BCI Preclinical Imaging Facility
LG 65 & LG 66, Lower Ground Floor, John Vane Science Centre
Charterhouse Square
London
EC1M 6BQ

Opening hours

  • Core hours: 9:00-17:00 Monday – Friday
  • Most equipment is available out of hours

Preclinical Imaging Facility team

Professor Jane Sosabowski

Professor of Radionuclide Imaging and Therapy

Jana Kim Profile Photo

Dr Jana Kim

Preclinical Imaging Facility Manager

Dhifaf Jasim profile picture

Dr Dhifaf Jasim

Radiochemistry Facility Manager, Preclinical Imaging Core

Julie Cleaver profile picture

Julie Cleaver

Facility Research Technician


Getting Started

Please email us with a brief description of your request.

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Prices

For internal users, please visit our iLab page

For external users, please contact us by email:

In vivo equipment: jana.kim@qmul.ac.uk

Ex-vivo equipment and chemistry: d.jasim@qmul.ac.uk

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Services and support

We provide comprehensive support to researchers, from study design and project planning through to equipment training and data analysis. We are also able to run projects as a service from start to finish and we work closely with the animal technician service (ATS).

We encourage researchers to contact us early in the planning stages so we can help identify the most effective and appropriate solutions.

Our equipment is available to all Queen Mary University of London departments, as well as to external users.

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Equipment

Our facility is equipped with a wide range of imaging equipment, offering affordable and accessible in vivo imaging solutions. Our facilities include a fully equipped radiochemistry laboratory where our expert staff can assist in developing custom-targeted imaging agents for PET and SPECT or molecular radiotherapy agents.

Milabs VECTor6CTXUHR SPECT/PET/CT (Single Photon Computed Tomography)

  • This instrument enables single and multi-animal imaging (up to 4 animals simultaneously) for the acquisition of 3D whole-body datasets.
  • SPECT is commonly used for imaging specific biological targets with sub-millimetre resolution using radiolabelled ligands. It can, for example, detect receptors upregulated in tumours or co-localise radiolabelled CAR-T cells or oncolytic viruses with tumours. Our expert staff and fully equipped radiochemistry laboratory can assist in developing custom-targeted imaging agents for both PET and SPECT applications.
  • The system supports imaging with low to high-energy SPECT radiotracers as well as PET radiotracers and multi-isotope simultaneous SPECT/ PET scans.
  • For cardiovascular applications, an ECG and respiratory gating system is available.
  • Nuclear imaging data is co-registered with CT to provide detailed anatomical mapping. CT can also be used independently, offering ultra-high resolution down to approximately 30µm for focused in vivo scans, such as tracking bone disease progression or imaging the vascular network using appropriate contrast agents.
  • We offer comprehensive training to enable users to operate this instrument independently.

Mediso nanoScanPET/CT (Positron Emission Tomography)

  • This system supports both single and multi-animal imaging (up to 4 animals simultaneously) for the acquisition of 3D whole-body datasets. We offer F-18-FDG PET imaging to detect metabolic changes in your model. Our expert team, along with a fully equipped radiochemistry laboratory, can assist in developing custom targeted radiometal-based imaging agents (e.g. Zr-89, Ga-68, Cu-64).
  • The system includes ECG and respiratory gating capabilities for cardiovascular applications.
  • PET data is co-registered with the CT image to provide an attenuation and anatomical map for better quantitation and ease of analysis. CT can also be used independently.

Bruker Icon 1T MRI (Magnetic Resonance Imaging)

  • Our 1T MRI offers good soft tissue contrast, making it an efficient screening tool for internal tumours, useful for acquiring volumetric measurements. The system has been used for a wide range of applications, from characterizing tumour progression over time to detecting and measuring aneurysms, investigating brain trauma, and conducting cardiac imaging. Gadolinium contrast agents can be used.
  • Most users can be trained within a few hours to operate this instrument independently.

Perkin Elmer IVIS Lumina III Bioluminescence and Fluorescence imaging

  • Our IVIS offers high-throughput 2D optical imaging (up to five mice can be imaged simultaneously in under 2 minutes).
  • Bioluminescence imaging (BLI) allows tracking of cells genetically modified to express the luciferase reporter construct. With no “off-target” signals, BLI is ideal for low-resolution longitudinal monitoring of changes in disease burden.
  • The fluorescence imaging (FLI) function features a wide range of excitation and emission filters, enabling the use of various FLI probes to target and image specific structures or processes. The spectral un-mixing feature minimises background signal and enables simultaneous imaging of multiple probes.
  • Again, this instrument is straightforward to operate, and training only takes a few hours.

Visual Sonics Vevo F2 Ultrasound

  • Our Vevo F2 ultrasound combines excellent soft tissue resolution for anatomical imaging with the ability to assess functional attributes such as blood flow.
  • It can be used for a variety of applications, including internal tumour and structure detection, volumetric measurements, tumour vascularity and blood flow assessment, tissue perfusion analysis, and image-guided injections for procedural refinement.
  • The F2 is equipped with both 29 MHz and 57 MHz probes and supports multiple imaging modes, including B-mode, M-mode, Colour Doppler (for flow), Tissue Doppler, Power Doppler (tumour imaging), EKV, as well as 3D and 4D imaging capabilities.

XStrahl SARRP 200 Precision Irradiator

  • The SARRP provides targeted external beam irradiation for small animals, ideal for focused irradiation of subcutaneous or orthotopic tumours, such as those in the lung.
  • The system is equipped with a CT for precise image-guided treatment planning.
  • The system is user-friendly, and training usually only takes a few hours

RS-2000 Whole Body Irradiator

  • The RS-2000 irradiator is designed for both whole-body and cell irradiation. Whole-animal irradiation is commonly used for immune system suppression, such as prior to a bone marrow transplant or T-cell infusion.

Emit Xerra TM Ex vivo Cryo-fluorescence Tomography (CFT)

  • The Xerra™ system combines co-registered white-light anatomical images with fluorescence images to generate 3D datasets of cell clusters, isolated organs, or entire intact animals.
  • This ex vivo imaging platform bridges the gap between cellular-scale methods and whole-body imaging, enabling visualization at the sub-organ level within a single system.
  • CFT enables 3D visualization of drug biodistribution, delivery vehicles, and protein expression across whole animals or large tissue samples.
  • The system supports multiplexed imaging, allowing the simultaneous detection of multiple fluorescent probes for multi-target studies.
  • Xerra™ is equipped with six excitation lasers, supporting a wide range of commonly used fluorescent probes.
  • Multiple block sizes are available to balance throughput and resolution, ranging from approximately 55 µm in-plane resolution for large fields of view (e.g., up to ten mice or one rat; FOV ≈ 22 × 15 × 10 cm) down to approximately 20 µm in-plane resolution for isolated organs (FOV ≈ 5 × 4 × 4 cm).

InSight V5 Whole Blood Analyser

  • The InSight V5 blood analyser is 5-part differential haematology analyser.
  • Useful for assessing treatment toxicity and whole blood counts.
  • Has the capability to detect 23 parameters (WBC, Neu%, Lym%, Mon%, Eos%, Bas%, Neu#, Lym#, Mon#, Eos#, Bas#, RBC, HGB, HCT, MCV, MCH, MCHC, RDW-CV, RDW_SD, PLt, MPV, PDW and PCT).
  • Quick (60 sec) sample testing, easy to use with small sample volume (15ul) of whole blood.

DRI-CHEM NX600 Blood Chemistry Analyser

  • An automated clinical biochemistry analyser, using a colorimetric method of detection of various enzymes and markers.
  • Small sample volume of 10ul of plasma or serum can be used.
  • Useful for assessing for detecting functional markers (for example ALT, AST, ALP, ALB, Uric acid, Creatinine, BUN, GLU).

 

Data Analysis

Each instrument is equipped with its own easy-to-use acquisition software.

  • VivoQuant (Perceptive) is used for analysis of PET, SPECT, CT and MRI and for image presentation.
  • Fusion (Mediso) is also available for Nuclear Imaging, CT and MRI analysis.
  • Living Image (Revvity) is used for optical imaging analysis.
  • Vevo LAB (Visualsonics) is used for ultrasound imaging analysis.

A dedicated image analysis computer is available for booking in one of the ground floor offices, allowing analysis to be performed outside of the Preclinical Imaging Facility. All our analysis software is installed on this PC.